Research Group for Biomedical String Analysis
Introduction
Our research group is specialized in the analysis of strings (i.e., finite sequences of symbols). The research projects and applications focus on genomic data and biomedical natural language. We develop new computational methods and applies existing methods.
Expertise
The research group has expertise and experience in:
- Mathematical modeling
- Computational statistics
- Algorithm design
- Discrete mathematics
- Machine and deep learning
- Natural language processing
- Semantic web technologies
Cooperation with partners
- Analysis of genomic data
- Computational processing of biomedical texts
- Biomedical data integration (for both data bases and natural language)
- Computational support for drug discovery
Our engagement in teaching
We teach at the BSc and MSc levels and have PhD students in our group.
Our MSc thesis topics include the following areas and activities:
- Molecular evolution, phylogenetics
- Modelling, developing algorithms, programming
- Pipelining, simulation study, data analysis
- Biomedical natural language processing
- Biomedical data integration
