Dr. Joël Pothier

Berufserfahrung

• Postdoktorand
  Agroscope
  09 / 2008 - 04 / 2013
• Postdoktorand
  CNRS
  04 / 2008 - 07 / 2008

Netzwerk

Mitglied in Netzwerken

• Dropsa (2014-2018)
• NRP68 (2013-2016)
• Q-Detect (2010-2013)
• COST FA1104 (2013-2016)
• COST 873 (2008-2012)
• Swiss Group for Mass Spectrometry SGMS (since 2015)
• Société Française de Phytopathologie SFP (2009-2015)
• Swiss Society for Microbiology SGM-SSM (since 2010)
• COST CA16107 (2016-2020)
• COST CA16110 (2016-2020)
• COST CA22158 MiCropBiomes (2023-2027)
• COST CA22142 RootBenefit (2023-2027)

ORCID digital identifier

ORCID ID: 0000-0002-9604-7780

Projekte

• Bioprospektion und Genomik von Actinobakterien isoliert aus der Marchica-Lagune / Projektleiter:in / laufend
• Massennachweis des Tomato Brown Rugose Fruit Virus durch Hochdurchsatz-Sequenzierung / Projektleiter:in / laufend
• EBDOmics – Comparative genomics of Enterobacter spp. causing Bulb Decay of Onions / Stellv. Projektleiter:in / laufend
• Erbringung von Dienstleistungen im Bereich Einfuhrkontrollen von lebenden CITES Pflanzen aus der EU / Teammitglied / laufend
• ChitinOMix – A multidisciplinary project to understand the effect of chitin soil amendment on the plant response, natural microbial community and the fate of human pathogenic bacteria / Projektleiter:in / laufend
• MALDI-TOF MS for microorganism identification: from pattern recognition towards marker based approaches / Projektleiter:in / laufend
• Comparative genomics of the plant pathogen Xanthomonas arboricola pv. pruni and related xanthomonads / Projektleiter:in / laufend
• Modernes Biodiversitätsmonitoring mit Next-Generation Sequencing (NGS-Methoden) / Teammitglied / abgeschlossen
• Fire Blight App for Central Asia / Stellv. Projektleiter:in / abgeschlossen
• Akzeptanz einer App zur Kontaktnachverfolgung von SARS-CoV-2 in der Schweizer Bevölkerung / Teammitglied / abgeschlossen
• Induktion der Wirkstoffbildung bei Actinomyceten / Co-Projektleiter:in / abgeschlossen
• MinION2FixID: fast and reliable legume root nodule bacteria identification using nanopore sequencing technology / Co-Projektleiter:in / abgeschlossen
• Xhortomics: Entwicklung von diagnostischen und epidemiologischen Hilfsmitteln für die Xanthomonas hortorum Spezies Gruppe basierend auf OMICs Technologien / Co-Projektleiter:in / abgeschlossen
• Development of a fast and exact method for R. solanacearum detection in Swiss surface water samples / Co-Projektleiter:in / abgeschlossen
• Auswirkung der Cryokonservierung auf genetischer Ebene am Beispiel der Rebe / Stellv. Projektleiter:in / abgeschlossen
• Characterization of nitrogen dynamics in an aquaponic system / Teammitglied / abgeschlossen
• Vergleichende Genomik zur Abklärung der Insektenpathogenizität in Pflanzenassoziierte Pseudomonaden / Teammitglied / abgeschlossen
• Sepsis-Associated Microorganisms in Brazilian Ambulatories (SAMBA) / Teammitglied / abgeschlossen
• MycoTOF – Nachweis von mykotoxinbildenden Schimmelpilzen und Mykotoxinen / Co-Projektleiter:in / abgeschlossen
• COST Action – Sustainable production of high quality cherries for the European market / Projektleiter:in / abgeschlossen
• DROPSA – Strategies to develop effective, innovative and practical approaches to protect major European fruit crops from pests and pathogens / Projektleiter:in / abgeschlossen
• High-throughput proteomics of Thiodictyon synthrophicum strain Cad16T / Projektleiter:in / abgeschlossen
• Genomik und Transkriptomik von Erwinia und Pantoea / Teammitglied / abgeschlossen
• In-depth molecular analysis of stool and water samples collected in Kampala, Uganda / Projektleiter:in / abgeschlossen

Publikationen

• Garcia, Eva; Soares, Fabiana; Rodrigues, Cristiana Oliveira; Trovão, João; Pothier, Joël F.; Camelo, Alexandra; Espírito Santo, Christophe; Dragnev, Dian; Petrova, Eli; Costa, Joana; Bobev, Svetoslav,

  2024.

  Expansion of the host range of Xanthomonas euroxanthea : first occurence in sunflower in Bulgaria.

  Plant Disease.

  Verfügbar unter: https://doi.org/10.1094/PDIS-08-24-1691-SC

• Pas, Célia; Fieseler, Lars; Pothier, Joël F.; Briers, Yves,

  2024.

  Isolation, characterization, and receptor-binding protein specificity of phages PAS7, PAS59 and PAS61 infecting Shiga toxin-producing Escherichia coli O103 and O146.

  Scientific Reports.

  14(26050).

  Verfügbar unter: https://doi.org/10.1038/s41598-024-77463-x

• Dimaria, Giulio; Mosca, Alexandros; Russo, Marcella; Cubero, Jaime; Pothier, Joël F.; Koebnik, Ralf; Catara, Vittoria,

  2024.

  Draft genome sequence of Xanthomonas arboricola pv. pruni PVCT 262.1 isolated from Prunus dulcis in Italy.

  Microbiology Resource Announcements.

  13(7), S. e0027324.

  Verfügbar unter: https://doi.org/10.1128/mra.00273-24

• Kaufmann, Moritz; Li, Leilei; Van Poucke, Christof; Rhyner, Nicola; De Tender, Caroline; Uyttendaele, Mieke; Heyndrickx, Marc; Zipfel, Cyril; Pothier, Joël F.; Bart, Cottyn,

  2024.

  Soil type and associated microbiomes influences chitin’s growth-promotion effect in lettuce.

  Phytobiomes Journal.

  8(3), S. 248-261.

  Verfügbar unter: https://doi.org/10.1094/PBIOMES-12-23-0132-R

• Costa, Joana; Pothier, Joël F.; Bosis, Eran; Boch, Jens; Kölliker, Roland; Koebnik, Ralf,

  2023.

  A community-curated DokuWiki resource on diagnostics, diversity, pathogenicity and genetic control of Xanthomonads.

  Molecular Plant-Microbe Interactions.

  37(3), S. 347-353.

  Verfügbar unter: https://doi.org/10.1094/MPMI-11-23-0184-FI

• Kałużna, Monika; Prokić, Andjelka; Obradović, Aleksa; Weldon, William A.; Stockwell, Virginia O.; Pothier, Joël F.,

  2023.

  Specific and sensitive detection tools for Xanthomonas arboricola pv. corylina, the causal agent of bacterial blight of hazelnut, developed with comparative genomics.

  Frontiers in Plant Science.

  14(1254107).

  Verfügbar unter: https://doi.org/10.3389/fpls.2023.1254107

• Orfei, Benedetta; Pothier, Joël F.; Fenske, Linda; Blom, Jochen; Moretti, Chiaraluce; Buonaurio, Roberto; Smits, Theo H. M.,

  2023.

  Race-specific genotypes of Pseudomonas syringae pv. tomato are defined by the presence of mobile DNA elements within the genome.

  Frontiers in Plant Science.

  14(1197706).

  Verfügbar unter: https://doi.org/10.3389/fpls.2023.1197706

• Li, Leilei; Kaufmann, Moritz; Makechemu, Moffat; Van Poucke, Christof; De Keyser, Ellen; Uyttendaele, Mieke; Zipfel, Cyril; Cottyn, Bart; Pothier, Joël F.,

  2023.

  Assessment of transcriptional reprogramming of lettuce roots in response to chitin soil amendment.

  Frontiers in Plant Science.

  14(1158068).

  Verfügbar unter: https://doi.org/10.3389/fpls.2023.1158068

• Arend, Lavinia N.V.S.; Bergamo, Ricardo; Rocha, Fabiano B.; Bail, Larissa; Ito, Carmen; Baura, Valter A.; Balsanelli, Eduardo; Pothier, Joël F.; Rezzonico, Fabio; Pilonetto, Marcelo; Smits, Theo H.M.; Tuon, Felipe Francisco,

  2023.

  Dissemination of NDM-producing bacteria in Southern Brazil.

  Diagnostic Microbiology and Infectious Disease.

  106(2), S. 115930.

  Verfügbar unter: https://doi.org/10.1016/j.diagmicrobio.2023.115930

• Pothier, Joël F.; Bolt, Valentin; Arn, Fabienne; Frasson, David; Rhyner, Nicola; Sievers, Martin,

  2023.

  High-quality draft genome sequence of Streptomyces albidoflavus CCOS 2040, isolated from a Swiss soil sample.

  Microbiology Resource Announcements.

  12(3), S. e01225-22.

  Verfügbar unter: https://doi.org/10.1128/mra.01225-22

• Sulja, Arburon; Pothier, Joël F.; Blom, Jochen; Moretti, Chiaraluce; Buonaurio, Roberto; Rezzonico, Fabio; Smits, Theo H. M.,

  2022.

  Comparative genomics to examine the endophytic potential of Pantoea agglomerans DAPP-PG 734.

  BMC Genomics.

  23(742).

  Verfügbar unter: https://doi.org/10.1186/s12864-022-08966-y

• Schmautz, Zala; Walser, Jean-Claude; Espinal, Carlos A.; Gartmann, Florentina; Scott, Benjamin; Pothier, Joël F.; Frossard, Emmanuel; Junge, Ranka; Smits, Theo H. M.,

  2022.

  Microbial diversity across compartments in an aquaponic system and its connection to the nitrogen cycle.

  Science of the Total Environment.

  852(158426).

  Verfügbar unter: https://doi.org/10.1016/j.scitotenv.2022.158426

• Dia, Nay C.; Cottyn, Bart; Blom, Jochen; Smits, Theo H. M.; Pothier, Joël F.,

  2022.

  Differentiation of the Xanthomonas hortorum – Xanthomonas hydrangeae species complex using sensitive and selective LAMP assays.

  Frontiers in Agronomy.

  4(898778).

  Verfügbar unter: https://doi.org/10.3389/fagro.2022.898778

• Silva, Kayla Gisela; Martins, Leonor; Teixeira, Miguel; Pothier, Joël F.; Tavares, Fernando,

  2022.

  DNA markers for detection and genotyping of Xanthomonas euroxanthea.

  Microorganisms.

  10(6), S. 1078.

  Verfügbar unter: https://doi.org/10.3390/microorganisms10061078

• Kałużna, Monika; Pothier, Joël F.,

  2022.

  Complete genome sequence data of two Xanthomonas arboricola strains isolated from blueberry plants displaying bacterial leaf blight in Poland.

  Phytopathology.

  112(8), S. 1814-1818.

  Verfügbar unter: https://doi.org/10.1094/PHYTO-11-21-0484-A

• Ruinelli, Michela; Blom, Jochen; Smits, Theo H. M.; Pothier, Joël F.,

  2022.

  Comparative genomics of Prunus-associated members of the Pseudomonas syringae species complex reveals traits supporting co-evolution and host adaptation.

  Frontiers in Microbiology.

  13(804681).

  Verfügbar unter: https://doi.org/10.3389/fmicb.2022.804681

• Dia, Nay C.; Morinière, Lucas; Cottyn, Bart; Bernal, Eduardo; Jacobs, Jonathan M.; Koebnik, Ralf; Osdaghi, Ebrahim; Potnis, Neha; Pothier, Joël F.,

  2022.

  Xanthomonas hortorum – beyond gardens : current taxonomy, genomics, and virulence repertoires.

  Molecular Plant Pathology.

  23(5), S. 597-621.

  Verfügbar unter: https://doi.org/10.1111/mpp.13185

• Hakalová, Eliška; Čechová, Jana; Tekielska, Dorota A.; Eichmeier, Ales; Pothier, Joël F.,

  2022.

  Combined effect of thyme and clove phenolic compounds on Xanthomonas campestris pv. campestris and biocontrol of black rot disease on cabbage seeds.

  Frontiers in Microbiology.

  13.

  Verfügbar unter: https://doi.org/10.3389/fmicb.2022.1007988

• Knecht, Leandra E.; Born, Yannick; Pelludat, Cosima; Pothier, Joël F.; Smits, Theo H. M.; Loessner, Martin J.; Fieseler, Lars,

  2022.

  Spontaneous resistance of Erwinia amylovora against bacteriophage Y2 affects infectivity of multiple phages.

  Frontiers in Microbiology.

  13(908346).

  Verfügbar unter: https://doi.org/10.3389/fmicb.2022.908346

• Dia, Nay C.; Van Vaerenbergh, Johan; Van Malderghem, Cinzia; Blom, Jochen; Smits, Theo H. M.; Cottyn, Bart; Pothier, Joël F.,

  2021.

  Xanthomonas hydrangeae sp. nov., a novel plant pathogen isolated from Hydrangea arborescens.

  International Journal of Systematic and Evolutionary Microbiology.

  71(12).

  Verfügbar unter: https://doi.org/10.1099/ijsem.0.005163

• Kałużna, Monika; Fischer‐Le Saux, Marion; Pothier, Joël; Jacques, Marie‐Agnès; Obradović, Aleksa; Tavares, Fernando; Stefani, Emilio,

  2021.

  Xanthomonas arboricola pv. juglandis and pv. corylina: Brothers or distant relatives? : genetic clues, epidemiology, and insights for disease management.

  Molecular Plant Pathology.

  22(12), S. 1481-1499.

  Verfügbar unter: https://doi.org/10.1111/mpp.13073

• Cottyn, B.; De Paepe, B.; Dia, Nay; Van Malderghem, C.; Pothier, Joël; Van Vaerenbergh, J.,

  2021.

  First report of bacterial leaf spot of Hydrangea in retail nurseries in Belgium caused by strains assigned to a new Xanthomonas hortorum clade.

  New Disease Reports.

  43(2), S. e12008.

  Verfügbar unter: https://doi.org/10.1002/ndr2.12008

• Catara, Vittoria; Cubero, Jaime; Pothier, Joël; Bosis, Eran; Bragard, Claude; Đermić, Edyta; Holeva, Maria C.; Jacques, Marie-Agnès; Petter, Francoise; Pruvost, Olivier; Robène, Isabelle; Studholme, David J.; Tavares, Fernando; Vicente, Joana G.; Koebnik, Ralf; Costa, Joana,

  2021.

  Trends in molecular diagnosis and diversity studies for phytosanitary regulated Xanthomonas.

  Microorganisms.

  9(4), S. 862.

  Verfügbar unter: https://doi.org/10.3390/microorganisms9040862

• Fernandes, Camila; Martins, Leonor; Teixeira, Miguel; Blom, Jochen; Pothier, Joël; Fonseca, Nuno A.; Tavares, Fernando,

  2021.

  Comparative genomics of Xanthomonas euroxanthea and Xanthomonas arboricola pv. juglandis strains isolated from a single walnut host tree.

  Microorganisms.

  9(3), S. 624.

  Verfügbar unter: https://doi.org/10.3390/microorganisms9030624

• Pothier, Joël F.; Kałużna, Monika; Prokić, Andjelka; Obradovic, Aleksa; Rezzonico, Fabio,

  2021.

  Complete genome and plasmid sequence data of three Xanthomonas arboricola pv. corylina strains, the bacterium responsible for bacterial blight of hazelnut.

  Phytopathology.

  112(4), S. 956-960.

  Verfügbar unter: https://doi.org/10.1094/PHYTO-08-21-0356-A

• Puławska, Joanna; Kałużna, Monika; Warabieda, Wojciech; Pothier, Joël F.; Gétaz, Michael; van der Wolf, Jan M.,

  2020.

  Transcriptome analysis of Xanthomonas fragariae in strawberry leaves.

  Scientific Reports.

  10(20582).

  Verfügbar unter: https://doi.org/10.1038/s41598-020-77612-y

• Dia, Nay C.; Rezzonico, Fabio; Smits, Theo H. M.; Pothier, Joël F.,

  2020.

  Complete or high-quality draft genome sequences of six Xanthomonas hortorum strains sequenced with short- and long-read technologies.

  Microbiology Resource Announcements.

  9(41), S. e00828-20.

  Verfügbar unter: https://doi.org/10.1128/MRA.00828-20

• Martins, Leonor; Fernandes, Camila; Blom, Jochen; Dia, Nay C.; Pothier, Joël F.; Tavares, Fernando,

  2020.

  Xanthomonas euroxanthea sp. nov. : a new xanthomonad species including pathogenic and non-pathogenic strains of walnut.

  International Journal of Systematic and Evolutionary Microbiology.

  70(12), S. 6024-6031.

  Verfügbar unter: https://doi.org/10.1099/ijsem.0.004386

• Gétaz, Michael; Puławska, Joanna; Smits, Theo H.M.; Pothier, Joël F.,

  2020.

  Host–pathogen interactions between Xanthomonas fragariae and its host Fragaria × ananassa investigated with a dual RNA-Seq analysis.

  Microorganisms.

  8(8), S. 1253.

  Verfügbar unter: https://doi.org/10.3390/microorganisms8081253

• Gétaz, Michael; Blom, Jochen; Smits, Theo H. M.; Pothier, Joël F.,

  2020.

  Comparative genomics of Xanthomonas fragariae and Xanthomonas arboricola pv. fragariae reveals intra- and interspecies variations.

  Phytopathology Research.

  2020(2), S. 17.

  Verfügbar unter: https://doi.org/10.1186/s42483-020-00061-y

• Rothen, Julian; Sapugahawatte, Dulmini Nanayakkara; Li, Carmen; Lo, Norman; Vogel, Guido; Foucault, Frédéric; Pflüger, Valentin; Pothier, Joël; Blom, Jochen; Daubenberger, Claudia; Ip, Margaret,

  2020.

  A simple, rapid typing method for Streptococcus agalactiae based on ribosomal subunit proteins by MALDI-TOF MS.

  Scientific Reports.

  10(8788).

  Verfügbar unter: https://doi.org/10.1038/s41598-020-65707-5

• Fossou, Romain K.; Pothier, Joël F.; Zézé, Adolphe; Perret, Xavier,

  2020.

  Bradyrhizobium ivorense sp. nov. as a potential local bioinoculant for Cajanus cajan cultures in Côte d’Ivoire.

  International Journal of Systematic and Evolutionary Microbiology.

  70(2), S. 1421-1430.

  Verfügbar unter: https://doi.org/10.1099/ijsem.0.003931

• Arn, Fabienne; Frasson, David; Kroslakova, Ivana; Rezzonico, Fabio; Pothier, Joël; Riedl, Rainer; Sievers, Martin,

  2020.

  Isolation and identification of actinomycetes strains from Switzerland and their biotechnological potential.

  Chimia.

  74(5), S. 382-390.

  Verfügbar unter: https://doi.org/10.2533/chimia.2020.382

• Schneeberger, Pierre H. H.; Fuhrimann, Samuel; Becker, Sören L.; Pothier, Joël F.; Duffy, Brion; Beuret, Christian; Frey, Jürg E.; Utzinger, Jürg,

  2019.

  Qualitative microbiome profiling along a wastewater system in Kampala, Uganda.

  Scientific Reports.

  9(1), S. 17334.

  Verfügbar unter: https://doi.org/10.1038/s41598-019-53569-5

• Luedin, Samuel M.; Storelli, Nicola; Danza, Francesco; Roman, Samuele; Wittwer, Matthias; Pothier, Joël F.; Tonolla, Mauro,

  2019.

  Mixotrophic growth under micro-oxic conditions in the purple sulfur bacterium "Thiodictyon syntrophicum".

  Frontiers in Microbiology.

  10(384).

  Verfügbar unter: https://doi.org/10.3389/fmicb.2019.00384

• Rutz, Dominik; Frasson, David; Sievers, Martin; Blom, Jochen; Rezzonico, Fabio; Pothier, Joël F.; Smits, Theo H.M.,

  2019.

  Comparative genomic analysis of the biotechnological potential of the novel species Pseudomonas wadenswilerensis CCOS 864T and Pseudomonas reidholzensis CCOS 865T.

  Diversity.

  2019(11), S. 204.

  Verfügbar unter: https://doi.org/10.3390/d11110204

• Ruinelli, Michela; Blom, Jochen; Smits, Theo; Pothier, Joël,

  2019.

  Comparative genomics and pathogenicity potential of members of the Pseudomonas syringae species complex on Prunus spp.

  BMC Genomics.

  20(172).

  Verfügbar unter: https://doi.org/10.1186/s12864-019-5555-y

• Luedin, Samuel; Liechti, Nicole; Cox, Raymond P.; Danza, Francesco; Frigaard, Niels-Ulrik; Posth, Nicole; Pothier, Joël F.; Roman, Samuele; Storelli, Nicola; Wittwer, Matthias; Tonolla, Mauro,

  2019.

  Draft genome sequence of Chromatium okenii isolated from the stratified alpine Lake Cadagno.

  Scientific Reports.

  9(1), S. 1936.

  Verfügbar unter: https://doi.org/10.1038/s41598-018-38202-1

• Rutz, Dominik; Frasson, David; Sievers, Martin; Blom, Jochen; Rezzonico, Fabio; Pothier, Joël F.; Smits, Theo H. M.,

  2019.

  High-quality draft genome sequence of Pseudomonas reidholzensis strain CCOS 865T.

  Microbiology Resource Announcements.

  8(3).

  Verfügbar unter: https://doi.org/10.1128/MRA.01502-18

• Rothen, Julian; Pothier, Joël F.; Foucault, Frédéric; Blom, Jochen; Nanayakkara, Dulmini; Li, Carmen; Ip, Margaret; Tanner, Marcel; Vogel, Guido; Pflüger, Valentin; Daubenberger, Claudia A.,

  2019.

  Subspecies typing of Streptococcus agalactiae based on ribosomal subunit protein mass variation by MALDI-TOF MS.

  Frontiers in Microbiology.

  10(471).

  Verfügbar unter: https://doi.org/10.3389/fmicb.2019.00471

• Smits, Theo H.M.; Rezzonico, Fabio; Frasson, David; Vesga, Pilar; Vacheron, Jordan; Blom, Jochen; Pothier, Joël F.; Keel, Christoph; Maurhofer, Monika; Sievers, Martin,

  2019.

  Updated genome sequence and annotation for the full genome of Pseudomonas protegens CHA0.

  Microbiology Resource Announcements.

  8(39).

  Verfügbar unter: https://doi.org/10.1128/MRA.01002-19

• Rutz, Dominik; Frasson, David; Sievers, Martin; Blom, Jochen; Rezzonico, Fabio; Pothier, Joël; Smits, Theo,

  2018.

  High-quality draft genome sequence of pseudomonas wadenswilerensis CCOS 864T.

  Microbiology Resource Announcements.

  7(16).

  Verfügbar unter: https://doi.org/10.1128/MRA.01059-18

• Fernandes, Camila; Blom, Jochen; Pothier, Joël F.; Tavares, Fernando,

  2018.

  High-quality draft genome sequence of xanthomonas arboricola pv. juglandis CPBF 1521, isolated from leaves of a symptomatic walnut tree in Portugal without a past of phytosanitary treatment.

  Microbiology Resource Announcements.

  7(16).

  Verfügbar unter: https://doi.org/10.1128/MRA.00887-18

• Fernandes, Camila; Blom, Jochen; Pothier, Joël F.; Tavares, Fernando,

  2018.

  High-Quality draft genome sequence of xanthomonas sp. strain CPBF 424, a walnut-pathogenic strain with atypical features.

  Microbiology Resource Announcements.

  7(15).

  Verfügbar unter: https://doi.org/10.1128/MRA.00921-18

• Normand, Philippe; Nouioui, Imen; Pujic, Petar; Fournier, Pascale; Dubost, Audrey; Schwob, Guillaume; Klenk, Hans-Peter; Nguyen, Agnès; Abrouk, Danis; Herrera-Belaroussi, Aude; Pothier, Joël F.; Pflüger, Valentin; Fernandez, Maria P.,

  2018.

  Frankia canadensis sp. nov., isolated from root nodules of Alnus incana subspecies rugosa.

  International Journal of Systematic and Evolutionary Microbiology.

  68, S. 3001-3011.

  Verfügbar unter: https://doi.org/10.1099/ijsem.0.002939

• Luedin, Samuel M.; Pothier, Joël F.; Danza, Francesco; Storelli, Nicola; Frigaard, Niels-Ulrik; Wittwer, Matthias; Tonolla, Mauro,

  2018.

  Complete genome sequence of “Thiodictyon syntrophicum” sp. nov. strain Cad16T, a photolithoautotrophic purple sulfur bacterium isolated from the alpine meromictic Lake Cadagno.

  Standards in Genomic Sciences.

  13(14).

  Verfügbar unter: https://doi.org/10.1186/s40793-018-0317-z

• Knecht, Leandra E.; Born, Yannick; Pothier, Joël F.; Loessner, Martin J.; Fieseler, Lars,

  2018.

  Complete genome sequences of erwinia amylovora phages vB_EamP-S2 and vB_EamM-Bue1.

  Microbiology Resource Announcements.

  7(3).

  Verfügbar unter: https://doi.org/10.1128/MRA.00891-18

• Gétaz, Michael; Krijger, Marjon; Rezzonico, Fabio; Smits, Theo; van der Wolf, Jan M.; Pothier, Joël F.,

  2018.

  Genome-based population structure analysis of the strawberry plant pathogen Xanthomonas fragariae reveals two distinct groups that evolved independently before its species description.

  Microbial Genomics.

  4(7).

  Verfügbar unter: https://doi.org/10.1099/mgen.0.000189

• Gétaz, Michael; Baeyen, Steve; Blom, Jochen; Maes, Martine; Cottyn, Bart; Pothier, Joël F.,

  2018.

  High-quality draft genome sequences of five xanthomonas arboricola pv. fragariae isolates.

  Genome Announcements.

  6(7).

  Verfügbar unter: https://doi.org/10.1128/genomeA.01585-17

• Rezzonico, Fabio; Duffy, Brion; Smits, Theo H.M.; Pothier, Joël F.,

  2017.

  Erwinia species identification using matrix-assisted laser desorption ionization-time of flight mass spectrometry.

  Journal of Plant Pathology.

  99(Special issue), S. 121-129.

  Verfügbar unter: https://doi.org/10.4454/jpp.v99i0.3916

• Gétaz, Michael; Bühlmann, Andreas; Schneeberger, Pierre H. H.; Van Malderghem, Cinzia; Duffy, Brion; Maes, Martine; Pothier, Joël F.; Cottyn, Bart,

  2017.

  A diagnostic tool for improved detection of Xanthomonas fragariae using a rapid and highly specific LAMP assay designed with comparative genomics.

  Plant Pathology.

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